- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g16162 | |
| Cluster | HCCA: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272900 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00266930 | OTP81 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00083p00015670 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00084p00089150 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003810 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015988 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034782 | LPA66 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057899 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069059 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g079794 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g096701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110646 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g113540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18040 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38141 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02416 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02938 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21253 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24412 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05709 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16416 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33154 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33642 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g47255 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g56508 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09002 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g31078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g36807 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g59941 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33231.t1 | CRR22, Aspi01Gene33231 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009022 | No alias | not classified & original description: CDS=1-2334 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030454 | No alias | not classified & original description: CDS=2-2074 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g034904 | No alias | not classified & original description: CDS=1-1944 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0098.g043939 | EMB2758 | not classified & original description: CDS=1-1746 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0261.g060752 | CRR22 | not classified & original description: CDS=1-1500 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0515.g074972 | No alias | not classified & original description: CDS=1-2211 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0873.g090702 | No alias | not classified & original description: CDS=1-2778 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05714 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12686 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19296 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29958 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34428 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45997 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G077000.1 | EMB2261, Ceric.15G077000 | not classified & original description: pacid=50639459... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G053700.1 | Ceric.26G053700 | not classified & original description: pacid=50599734... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G051900.1 | Ceric.36G051900 | not classified & original description: pacid=50568048... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G053600.1 | Ceric.37G053600 | not classified & original description: pacid=50616731... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g04499 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08816 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g32689 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g13211 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g39002 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46795 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51266 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51448 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12101 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20638 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g18570 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g19657 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g33834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35976 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06769 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25278 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g38636 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g38645 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21836 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g23094 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30445 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g31855 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02439 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g02794 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g03862 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04505 | CRR2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g20888 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22375 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23593 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23611 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g25269 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g29840 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g29945 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g29969 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30084 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30634 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06412 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11000 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32992 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59354 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007447 | No alias | not classified & original description: CDS=108-3026 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016993 | No alias | not classified & original description: CDS=162-2816 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0245.g026691 | No alias | not classified & original description: CDS=1-2898 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15563 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g009790.4.1 | Solyc09g009790 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16563 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g18381 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g44822 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g52254 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06592 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30430 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 178 | 203 |
| IPR002885 | Pentatricopeptide_repeat | 46 | 73 |
| IPR002885 | Pentatricopeptide_repeat | 380 | 404 |
| IPR002885 | Pentatricopeptide_repeat | 102 | 150 |
| IPR002885 | Pentatricopeptide_repeat | 506 | 554 |
| IPR002885 | Pentatricopeptide_repeat | 304 | 351 |
| IPR002885 | Pentatricopeptide_repeat | 204 | 250 |
| IPR002885 | Pentatricopeptide_repeat | 406 | 453 |
| No external refs found! |