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  5. Pnu_g16105

Pnu_g16105 (IMPA-4)


Aliases : IMPA-4

Description : not classified & original description: none


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16105

Target Alias Description ECC score Gene Family Method Actions
AT4G02150 IMPA-3, MOS6, ATIMPALPHA3 ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene54518.t1 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Ceric.34G036300.1 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01003243001 No alias Importin subunit alpha-1b OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
MA_5852g0010 IMPA-4 importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR032413 Arm_3 108 152
IPR000225 Armadillo 55 92
IPR000225 Armadillo 11 50
No external refs found!