Als_g57720 (UBP12)

Aliases : UBP12

Description : not classified & original description: none

Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g57720
Cluster	HCCA: Cluster_234

Target	Alias	Description	ECC score	Gene Family Method
Adi_g107348	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g33294	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06394	UBP12	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Aob_g29816	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29880	UBP12	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene23681.t1	Aspi01Gene23681	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Azfi_s0006.g010362	UBP12	not classified & original description: CDS=350-7828	0.04	OrthoFinder output from all 47 species
Cba_g11482	UBP13	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.15G071100.1	UBP12, Ceric.15G071100	not classified & original description: pacid=50640759...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021281.14	No alias	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Dcu_g23057	UBP12	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Dde_g12126	UBP12	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ehy_g18112	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g11501	UBP12	not classified & original description: none	0.09	OrthoFinder output from all 47 species
MA_10436921g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_1628982g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_17762g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_6934376g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_7843052g0010	UBP13	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ppi_g49066	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740	UBP12	not classified & original description: CDS=294-7754	0.03	OrthoFinder output from all 47 species
Smo447032	UBP12	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Spa_g09112	UBP12	not classified & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021905	DUF3517	2158	2467
IPR001394	Peptidase_C19_UCH	1598	1966

External Links

No external refs found!

Als_g57720 (UBP12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation