Pnu_g16043 (HSL1, VAL2, HSI2-L1)

Aliases : HSL1, VAL2, HSI2-L1

Description : LAV-VAL-type transcription factor & original description: none

Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g16043
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene59036.t1	HSI2, VAL1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_119006g0010	HSI2, VAL1	B3 domain-containing protein Os07g0679700 OS=Oryza...	0.03	OrthoFinder output from all 47 species
MA_732760g0010	HSL1, VAL2, HSI2-L1	B3 domain-containing transcription repressor VAL2...	0.03	OrthoFinder output from all 47 species
Spa_g06873	HSL1, VAL2, HSI2-L1	LAV-VAL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	28	128

External Links

No external refs found!