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  5. Als_g57259

Als_g57259


Description : not classified & original description: none


Gene families : OG0004978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g57259
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene52165.t1 Aspi01Gene52165 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64927.t1 Aspi01Gene64927 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G090600.1 Ceric.07G090600 not classified & original description: pacid=50627354... 0.04 OrthoFinder output from all 47 species
Ceric.12G087900.1 Ceric.12G087900 not classified & original description: pacid=50600548... 0.03 OrthoFinder output from all 47 species
Dde_g25536 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g19218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g50005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13633 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_48044g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g01120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g11203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22201 RPT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019041 No alias not classified & original description: CDS=71-1987 0.05 OrthoFinder output from all 47 species
Spa_g10351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 299 425
IPR000210 BTB/POZ_dom 13 120
No external refs found!