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  5. Als_g57251

Als_g57251 (ATG8E, ATATG8E)


Aliases : ATG8E, ATATG8E

Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g57251
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cba_g68643 ATG8A, APG8A autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Cba_g69987 ATG8E, ATATG8E autophagosome ubiquitin-fold protein *(ATG8) & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.41 ATG8C Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 OrthoFinder output from all 47 species
Ppi_g12768 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 16 119
No external refs found!