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  5. Als_g54932

Als_g54932 (SUF4)


Aliases : SUF4

Description : FLC-binding component *(SUF4) of FRI-C transcription effector complex & original description: none


Gene families : OG0002334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54932

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256770 SUF4,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 OrthoFinder output from all 47 species
Adi_g059003 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.04 OrthoFinder output from all 47 species
Adi_g104399 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Ala_g20731 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Aob_g11141 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053789 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Ceric.18G072400.1 SUF4, Ceric.18G072400 FLC-binding component *(SUF4) of FRI-C transcription... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.2 SUF4 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Dcu_g22754 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.07 OrthoFinder output from all 47 species
Dcu_g23742 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.06 OrthoFinder output from all 47 species
GSVIVT01012145001 SUF4 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_38566 SUF4 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g38790.1 SUF4, LOC_Os09g38790 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g12714 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.09 OrthoFinder output from all 47 species
MA_10435270g0010 SUF4 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g26521 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Ore_g03322 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Pnu_g24490 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Ppi_g12837 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Sam_g35816 No alias FLC-binding component *(SUF4) of FRI-C transcription... 0.04 OrthoFinder output from all 47 species
Sam_g35817 No alias FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Solyc02g081620.3.1 SUF4, Solyc02g081620 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g16449 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.06 OrthoFinder output from all 47 species
Tin_g23103 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!