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  5. Als_g54758

Als_g54758 (EMB2758)


Aliases : EMB2758

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54758

Target Alias Description ECC score Gene Family Method Actions
Adi_g009423 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18957 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene12038.t1 Aspi01Gene12038 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05475 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36940 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18538 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07044 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g13399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g35189 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38043 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12909 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17070 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19088 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22807 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08832 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16330 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06005 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24631 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g20127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.1 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 768 861
IPR046848 E_motif 671 729
IPR002885 Pentatricopeptide_repeat 423 447
IPR002885 Pentatricopeptide_repeat 255 276
IPR002885 Pentatricopeptide_repeat 153 175
IPR002885 Pentatricopeptide_repeat 625 648
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 346 393
IPR002885 Pentatricopeptide_repeat 449 495
IPR002885 Pentatricopeptide_repeat 280 329
IPR002885 Pentatricopeptide_repeat 551 598
IPR046849 Eplus_motif 737 764
No external refs found!