Als_g54723 (EMB2219)

Aliases : EMB2219

Description : mTERF-type transcription factor & original description: none

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g54723

Target	Alias	Description	ECC score	Gene Family Method
AT5G23930	No alias	Mitochondrial transcription termination factor family protein	0.02	OrthoFinder output from all 47 species
Adi_g110583	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g09019	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22741	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30338	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67837.t1	Aspi01Gene67837	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g12846	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10365	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g17694	PTAC15	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009012001	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
GSVIVT01022213001	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
LOC_Os11g14130.1	LOC_Os11g14130	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Len_g24851	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g35819	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g43907	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10430524g0020	No alias	transcription factor (mTERF)	0.01	OrthoFinder output from all 47 species
MA_493420g0010	No alias	transcription factor (mTERF)	0.01	OrthoFinder output from all 47 species
Ore_g17587	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015528	No alias	mTERF-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g24410	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g067960.3.1	Solyc02g067960	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Solyc04g072500.1.1	Solyc04g072500	transcription factor (mTERF)	0.01	OrthoFinder output from all 47 species
Tin_g07429	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0045048	protein insertion into ER membrane	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051205	protein insertion into membrane	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	135	219
IPR003690	MTERF	232	329
IPR003690	MTERF	23	135

External Links

No external refs found!

Als_g54723 (EMB2219)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation