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  5. Als_g54686

Als_g54686 (AtMYB20, MYB20)


Aliases : AtMYB20, MYB20

Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54686
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00057800 MYB58, ATMYB58,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00221670 ATY53, ATMYB67,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G08810 MYB60, AtMYB60 myb domain protein 60 0.03 OrthoFinder output from all 47 species
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 OrthoFinder output from all 47 species
AT5G52600 AtMYB82, MYB82 myb domain protein 82 0.05 OrthoFinder output from all 47 species
AT5G59780 ATMYB59-1,... myb domain protein 59 0.03 OrthoFinder output from all 47 species
Aspi01Gene67215.t2 ATMIXTA, MYB16,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G036300.1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ceric.23G083400.1 ATMYB120,... MYB class-R2R3 subgroup-18 transcription factor &... 0.05 OrthoFinder output from all 47 species
Ehy_g04249 MYB7, ATY49, ATMYB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008303001 BW62B, BW62C,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01011447001 ATMIXTA, MYB16, ATMYB16 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01012149001 MYB114, AtMYB114 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013735001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01031496001 MYB36, AtMYB36 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035463001 MYB32, AtMYB32 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01036802001 MYB58, ATMYB58 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_15814 MYB41, AtMYB41 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_36145 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Gb_40629 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g09590.1 ATMYB38, MYB38,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g65370.1 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51799.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g42950.1 AtMYB79, MYB79,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50770.1 MYB58, ATMYB58,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g46610.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g02250.1 AtMYB93, MYB93,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os07g37210.1 MYB41, AtMYB41,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os11g47460.1 ATMYB59-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33070.1 ATMYB46, MYB46,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_16413g0010 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_24271g0020 AtMYB93, MYB93 transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
MA_322432g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_66255g0010 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.08 OrthoFinder output from all 47 species
Pnu_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14641 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.07 OrthoFinder output from all 47 species
Sam_g08648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g057910.3.1 AtMYB78, MYB78,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc04g074170.3.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc05g051550.2.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc06g005310.3.1 ATMYB48-1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc06g005330.3.1 ATMYB48-1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc08g076700.1.1 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g079270.3.1 AtMYB42, MYB42,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g38047 MYB106, NOK, AtMYB106 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g05973 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.06 OrthoFinder output from all 47 species
Zm00001e001492_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e003407_P001 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e007337_P001 DUO1, Zm00001e007337 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e007612_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e015125_P001 MYB305, ATMYB71,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e015239_P001 AtMYB17, MYB17,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e016583_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e019110_P001 MYB6, AtMYB6,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e020004_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Zm00001e020044_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e020993_P002 AtMYB112,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e024606_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e024682_P001 AtMYB42, MYB42,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e027003_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e028135_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e032298_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e032347_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e035025_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e035993_P001 MYB7, ATY49,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e038287_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e041547_P001 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 6 53
IPR001005 SANT/Myb 60 102
No external refs found!