Als_g54567


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54567

262
Target Alias Description ECC score Gene Family Method Actions
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018518 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056216 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g056937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25758 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06380 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55255 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19547 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19836 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46047 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67235 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67756 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67869 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75127 No alias not classified & original description: none0.03 OrthoFinder output from all 47 species
Cba_g75128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G020600.1 Ceric.05G020600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G002900.1 Ceric.09G002900 not classified & original description: pacid=50586532... 0.03 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.04 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.04 OrthoFinder output from all 47 species
Ceric.23G026100.1 Ceric.23G026100 not classified & original description: pacid=50611257... 0.05 OrthoFinder output from all 47 species
Ceric.25G001500.1 Ceric.25G001500 not classified & original description: pacid=50593180... 0.04 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g08463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22449 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06113 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14937 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26505 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23334 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15348 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19941 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004387 No alias not classified & original description: CDS=1-2973 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17848 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05155 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13474 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g28274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41079 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 45 91
IPR002885 Pentatricopeptide_repeat 146 192
IPR002885 Pentatricopeptide_repeat 262 309
IPR002885 Pentatricopeptide_repeat 354 374
IPR002885 Pentatricopeptide_repeat 236 256
No external refs found!