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  5. Gb_24405

Gb_24405


Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 558.3) & Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana (sp|q93za3|bbe13_arath : 380.0)


Gene families : OG_01_0000172 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000172_tree ,
OG_02_0000076 (LandPlants) Phylogenetic Tree(s): OG_02_0000076_tree ,
OG_03_0000069 (SeedPlants) Phylogenetic Tree(s): OG_03_0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24405
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00227150 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AT1G26380 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G26400 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
AT1G26420 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.06 Archaeplastida
AT2G34810 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
AT4G20830 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT4G20860 No alias FAD-binding Berberine family protein 0.05 Archaeplastida
AT5G44360 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT5G44380 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
AT5G44390 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
GSVIVT01015790001 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os08g06190.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os11g30310.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_10428737g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_162773g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_228933g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_613919g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g022850.1.1 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Solyc02g070160.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g079450.1.1 No alias Berberine bridge enzyme-like 23 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g065060.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc09g072660.4.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e040211_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00032p00227150 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AT1G26380 No alias FAD-binding Berberine family protein 0.02 LandPlants
AT1G30700 No alias FAD-binding Berberine family protein 0.05 LandPlants
AT1G30720 No alias FAD-binding Berberine family protein 0.03 LandPlants
AT4G20860 No alias FAD-binding Berberine family protein 0.03 LandPlants
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.04 LandPlants
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os06g35590.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
LOC_Os10g21690.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
MA_162773g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc06g065060.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Zm00001e040211_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AT1G30700 No alias FAD-binding Berberine family protein 0.03 SeedPlants
AT1G30730 No alias FAD-binding Berberine family protein 0.01 SeedPlants
AT4G20830 No alias FAD-binding Berberine family protein 0.01 SeedPlants
AT4G20860 No alias FAD-binding Berberine family protein 0.02 SeedPlants
AT5G44360 No alias FAD-binding Berberine family protein 0.02 SeedPlants
GSVIVT01021726001 No alias Berberine bridge enzyme-like 14 OS=Arabidopsis thaliana 0.02 SeedPlants
LOC_Os06g35590.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 SeedPlants
Solyc02g022850.1.1 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.01 SeedPlants
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.03 SeedPlants
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 115 251
IPR012951 BBE 499 556
No external refs found!