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  5. Als_g54155

Als_g54155 (HDA3, ATHD2A, HDT1, HD2A)


Aliases : HDA3, ATHD2A, HDT1, HD2A

Description : HD2-type histone deacetylase *(HD2/HDT) & original description: none


Gene families : OG0002165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54155

Target Alias Description ECC score Gene Family Method Actions
Adi_g045241 HDT3, HD2C HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Cba_g31332 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.65 ATFKBP53, FKBP53 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
GSVIVT01031404001 HDA3, ATHD2A, HDT1, HD2A Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Msp_g19073 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Pir_g07356 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Sam_g14661 No alias HD2-type histone deacetylase *(HD2/HDT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e018891_P001 HDA3, ATHD2A,... histone deacetylase (HDT/HD2) 0.02 OrthoFinder output from all 47 species
Zm00001e028512_P001 HDA3, ATHD2A,... histone deacetylase (HDT/HD2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041232 NPL 39 128
No external refs found!