Pnu_g15705 (OTP82)

Aliases : OTP82

Description : not classified & original description: none

Gene families : OG0035040 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0035040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g15705

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT3G49142	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.01	OrthoFinder output from all 39 species
GSVIVT01016860001	No alias	Putative pentatricopeptide repeat-containing protein...	0.03	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	242	265
IPR002885	Pentatricopeptide_repeat	167	214
IPR002885	Pentatricopeptide_repeat	66	112
IPR046848	E_motif	284	346
IPR032867	DYW_dom	382	419

External Links

No external refs found!