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Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00165910 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| AT2G23780 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g07215 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene43434.t1 | Aspi01Gene43434 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G045300.1 | Ceric.18G045300 | not classified & original description: pacid=50622046... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G045400.1 | Ceric.18G045400 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g56070.3 | LOC_Os01g56070 | RING-HC-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| Len_g06314 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g08340.1 | No alias | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g38674 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017142 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g078320.3.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g010670.1.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027370 | Znf-RING_euk | 67 | 102 |
| No external refs found! |