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  5. Als_g52993

Als_g52993


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g52993

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244740 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G28570 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G50930 BCS1 cytochrome BC1 synthesis 0.02 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40010 AATP1 AAA-ATPase 1 0.03 OrthoFinder output from all 47 species
Adi_g077316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72894.t1 Aspi01Gene72894 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011534 No alias not classified & original description: CDS=1-1398 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015858 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.05 OrthoFinder output from all 47 species
Ceric.19G071500.1 Ceric.19G071500 not classified & original description: pacid=50576054... 0.02 OrthoFinder output from all 47 species
Ceric.19G071600.1 Ceric.19G071600 not classified & original description: pacid=50575855... 0.03 OrthoFinder output from all 47 species
Ehy_g23306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032558001 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27546 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g19260.1 AATP1, LOC_Os01g19260 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g45450.1 LOC_Os01g45450 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51130.1 BCS1, LOC_Os05g51130 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g09490.1 AATP1, LOC_Os07g09490 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g26260.1 LOC_Os09g26260 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g27340.1 LOC_Os09g27340 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g44210.1 AATP1, LOC_Os12g44210 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10111030g0010 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_230170g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_28097g0010 BCS1 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_5260g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g03762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09595 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo407065 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc03g082640.3.1 Solyc03g082640 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g26231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46110 AATP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003357_P001 AATP1, Zm00001e003357 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013138_P001 Zm00001e013138 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034224_P001 Zm00001e034224 AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 7 57
No external refs found!