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  5. Als_g52023

Als_g52023 (LAC4, IRX12, ATLMCO4, LMCO4)


Aliases : LAC4, IRX12, ATLMCO4, LMCO4

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g52023
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G29130 ATLAC2, LAC2 laccase 2 0.02 OrthoFinder output from all 47 species
AT2G30210 LAC3 laccase 3 0.03 OrthoFinder output from all 47 species
AT2G38080 LAC4, IRX12,... Laccase/Diphenol oxidase family protein 0.02 OrthoFinder output from all 47 species
AT2G40370 LAC5 laccase 5 0.03 OrthoFinder output from all 47 species
AT5G01190 LAC10 laccase 10 0.03 OrthoFinder output from all 47 species
AT5G05390 LAC12 laccase 12 0.02 OrthoFinder output from all 47 species
AT5G58910 LAC16 laccase 16 0.03 OrthoFinder output from all 47 species
Adi_g053963 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aob_g13603 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ceric.06G043600.1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.1Z151100.1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g50138 LAC16 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g51693 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
GSVIVT01016513001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
GSVIVT01018939001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024795001 LAC4, IRX12,... Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
GSVIVT01025046001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
GSVIVT01025077001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
GSVIVT01033501001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034137001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
GSVIVT01034138001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
GSVIVT01034140001 ATLAC17, LAC17 Laccase-17 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00462 ATLAC17, LAC17 lignin laccase 0.02 OrthoFinder output from all 47 species
Gb_23947 LAC1, ATLAC1 Laccase-1 OS=Arabidopsis thaliana (sp|q9lms3|lac1_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61160.1 LAC12, LOC_Os01g61160 Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os01g62480.1 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
LOC_Os05g38420.1 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
LOC_Os07g01110.1 LAC7, LOC_Os07g01110 Laccase-14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g20090.1 LOC_Os09g20090 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
MA_811078g0010 LAC12 Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc02g062660.2.1 LAC11, Solyc02g062660 Laccase-11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g10678 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Tin_g44132 LAC1, ATLAC1 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001117 Cu-oxidase_2nd 180 331
IPR011706 Cu-oxidase_C 574 599
IPR011706 Cu-oxidase_C 463 552
IPR011707 Cu-oxidase_N 52 167
No external refs found!