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  5. Als_g52019

Als_g52019


Description : pre-mRNA splicing factor *(SF1) & original description: none


Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g52019

Target Alias Description ECC score Gene Family Method Actions
AT5G51300 No alias splicing factor-related 0.03 OrthoFinder output from all 47 species
Adi_g078788 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13487 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14038 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07374 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g73082 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G100600.1 Ceric.01G100600 pre-mRNA splicing factor *(SF1) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09600 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08280 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09001 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12745 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_11962g0020 No alias pre-mRNA splicing factor (SF1) 0.03 OrthoFinder output from all 47 species
Ore_g04834 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07204 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26612 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55171 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27159 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo73732 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Spa_g17324 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11604 No alias pre-mRNA splicing factor *(SF1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008383_P001 Zm00001e008383 pre-mRNA splicing factor (SF1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 207 276
No external refs found!