1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g15448

Pnu_g15448


Description : E3 ubiquitin ligase *(RNF170) & original description: none


Gene families : OG0005323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15448
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT4G33940 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Solyc01g103970.4.1 Solyc01g103970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0008303 caspase complex IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR027370 Znf-RING_euk 85 125
No external refs found!