Als_g51166 (ATPUB45, PUB45)

Aliases : ATPUB45, PUB45

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g51166

Target	Alias	Description	ECC score	Gene Family Method
AT1G27910	ATPUB45, PUB45	plant U-box 45	0.02	OrthoFinder output from all 47 species
LOC_Os04g41250.1	ATPUB45, PUB45,...	U-box domain-containing protein 7 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ppi_g02310	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019419	ATPUB45, PUB45	E3 ubiquitin ligase & original description: CDS=440-2971	0.02	OrthoFinder output from all 47 species
Sam_g16169	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007747_P003	ATPUB45, PUB45,...	U-box domain-containing protein 6 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e018944_P001	ATPUB45, PUB45,...	U-box domain-containing protein 45 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e041111_P003	ATPUB45, PUB45,...	U-box domain-containing protein 7 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0001671	ATPase activator activity	IEP	HCCA
MF	GO:0004476	mannose-6-phosphate isomerase activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
MF	GO:0008061	chitin binding	IEP	HCCA
CC	GO:0009277	fungal-type cell wall	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	283	352

External Links

No external refs found!