Gb_24061


Description : Cold shock protein 1 OS=Arabidopsis thaliana (sp|o65639|csp1_arath : 124.0)


Gene families : OG_01_0004200 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004200_tree ,
OG_02_0003617 (LandPlants) Phylogenetic Tree(s): OG_02_0003617_tree ,
OG_03_0003151 (SeedPlants) Phylogenetic Tree(s): OG_03_0003151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24061
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
Cre01.g013800 No alias No description available 0.01 Archaeplastida
Pp3c2_2680V3.1 No alias zinc knuckle (CCHC-type) family protein 0.03 Archaeplastida
Solyc06g073810.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g13450.1 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c1_33300V3.1 No alias zinc knuckle (CCHC-type) family protein 0.02 LandPlants
Pp3c2_2680V3.1 No alias zinc knuckle (CCHC-type) family protein 0.03 LandPlants
Solyc06g073810.4.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc06g073810.4.1 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001878 Znf_CCHC 424 440
IPR001878 Znf_CCHC 311 327
IPR001878 Znf_CCHC 271 285
IPR001878 Znf_CCHC 292 308
No external refs found!