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  5. Als_g50556

Als_g50556


Description : not classified & original description: none


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50556

Target Alias Description ECC score Gene Family Method Actions
AT2G40960 No alias Single-stranded nucleic acid binding R3H protein 0.01 OrthoFinder output from all 47 species
Als_g08651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45992.t1 Aspi01Gene45992 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025786001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os09g39462.2 LOC_Os09g39462 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g24819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027067_P002 Zm00001e027067 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004476 mannose-6-phosphate isomerase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001374 R3H_dom 56 103
IPR024771 SUZ 150 197
No external refs found!