1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g50192

Als_g50192


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50192
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.03 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18159 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09047 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0305.g063935 AT-GT2, GT2 not classified & original description: CDS=293-1360 0.06 OrthoFinder output from all 47 species
Azfi_s0506.g073955 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G006300.1 Ceric.35G006300 Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g08044 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g01380.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os03g02240.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10433499g0020 AT-GT2, GT2 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_331768g0020 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_47951g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g10229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35869 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36845 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023745 No alias Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Smo85122 No alias Trihelix transcription factor GT-2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc11g005380.2.1 Solyc11g005380 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Spa_g24159 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 246 330
IPR044822 Myb_DNA-bind_4 560 648
No external refs found!