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  5. Pnu_g15312

Pnu_g15312 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0014413 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0014413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15312

Target Alias Description ECC score Gene Family Method Actions
Gb_07636 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 39 species
Gb_34236 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 39 species
Gb_38679 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 39 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.01 OrthoFinder output from all 39 species
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 341 403
IPR002885 Pentatricopeptide_repeat 298 322
IPR002885 Pentatricopeptide_repeat 198 222
IPR002885 Pentatricopeptide_repeat 2 21
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 223 271
No external refs found!