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  5. Als_g49898

Als_g49898 (ARS5, PAF1, ATPSM30)


Aliases : ARS5, PAF1, ATPSM30

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0003925 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003925_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g49898
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Cre06.g304300 PAF2 Protein degradation.26S proteasome.20S core... 0.01 OrthoFinder output from all 47 species
Dac_g31137 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dac_g40351 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
MA_713708g0010 PAF2 Proteasome subunit alpha type-1-A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 57 79
IPR001353 Proteasome_sua/b 80 264
No external refs found!