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  5. Als_g49608

Als_g49608 (VAP27, VAP27-1, (AT)VAP, VAP)


Aliases : VAP27, VAP27-1, (AT)VAP, VAP

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g49608

Target Alias Description ECC score Gene Family Method Actions
AT1G08820 VAP27-2 vamp/synaptobrevin-associated protein 27-2 0.04 OrthoFinder output from all 47 species
AT2G23830 No alias PapD-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g058643 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01027683001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g16909 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2023.g028239 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Smo438734 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g090910.3.1 PVA12, Solyc01g090910 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e023141_P002 Zm00001e023141 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e041317_P001 PVA12, Zm00001e041317 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 112
No external refs found!