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  5. Als_g49455

Als_g49455 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g49455

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00097650 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00047820 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 OrthoFinder output from all 47 species
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.05 OrthoFinder output from all 47 species
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.05 OrthoFinder output from all 47 species
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g014210 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31181 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14195 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16447 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36836 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37548 ABCG40, PDR12,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g56716 ABCG40, PDR12,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g65335 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02142.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28063.t2 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66181.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0232.g059286 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=735-5249 0.03 OrthoFinder output from all 47 species
Ceric.01G109800.1 ABCG40, PDR12,... subfamily ABCG transporter & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.19G065500.1 PDR11, ATPDR11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G065600.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g540650 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Dac_g12912 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016993001 ATPDR7, PDR7 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01016998001 PDR1, ATPDR1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01017185001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01017187001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01017196001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
GSVIVT01017197001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01017200001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01028207001 ATPDR13, PDR13 Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01034746001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01035715001 PDR4, ATPDR4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g32690.1 PIS1, ABCG37,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os07g33780.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g28071 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10348400g0010 PDR1, ATPDR1 ABC transporter G family member 29 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10425791g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10426781g0010 PDR4, ATPDR4 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
MA_10427561g0020 ABCG40, PDR12,... ABC transporter G family member 31 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_108793g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_249533g0010 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_300423g0010 PEN3, ABCG36,... ABC transporter G family member 36 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_84624g0010 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_921943g0010 ABCG40, PDR12,... ABC transporter G family member 44 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Pir_g14833 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40989 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004775 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=697-5283 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004796 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=1-4422 0.03 OrthoFinder output from all 47 species
Solyc05g018510.3.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc08g067610.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc12g019640.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g28903 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45075 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003743_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e024257_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e027850_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 726 790
IPR013525 ABC_2_trans 509 721
IPR013525 ABC_2_trans 1231 1444
IPR003439 ABC_transporter-like_ATP-bd 173 355
IPR003439 ABC_transporter-like_ATP-bd 934 1086
IPR029481 ABC_trans_N 100 150
IPR043926 ABCG_dom 388 465
IPR043926 ABCG_dom 1115 1176
No external refs found!