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  5. Als_g48705

Als_g48705


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0001886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g48705

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00026390 evm_27.TU.AmTr_v1... Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
AT2G47410 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.05 OrthoFinder output from all 47 species
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.03 OrthoFinder output from all 47 species
Adi_g074760 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g18824 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ala_g21580 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Aob_g40174 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g59092 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44569.t2 Aspi01Gene44569 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53113.t1 Aspi01Gene53113 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0256.g060562 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.1Z073200.1 Ceric.1Z073200 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cre02.g078150 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g03214 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01035014001 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Gb_35200 No alias Dynein assembly factor with WDR repeat domains 1... 0.06 OrthoFinder output from all 47 species
LOC_Os03g19340.1 LOC_Os03g19340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10488 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g11003 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Lfl_g38764 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
MA_10430074g0010 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
MA_58934g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp2g00710.1 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Msp_g38962 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g08447 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g08815 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g16205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g060040.3.1 Solyc01g060040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g060050.3.1 Solyc01g060050 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Solyc01g079510.3.1 Solyc01g079510 Dynein assembly factor with WDR repeat domains 1... 0.07 OrthoFinder output from all 47 species
Tin_g20120 No alias substrate adaptor of CUL4-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e025834_P004 Zm00001e025834 Dynein assembly factor with WDR repeat domains 1... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 1965 2023
IPR001680 WD40_repeat 345 385
IPR001680 WD40_repeat 601 640
IPR001680 WD40_repeat 304 339
IPR001680 WD40_repeat 261 298
IPR001680 WD40_repeat 424 448
No external refs found!