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  5. Als_g48617

Als_g48617 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g48617

Target Alias Description ECC score Gene Family Method Actions
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 OrthoFinder output from all 47 species
Aspi01Gene68439.t1 PDR11, ATPDR11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016991001 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
MA_10427561g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_10432311g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10436632g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_249533g0010 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g21340.1 ATPDR3, PDR3 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Msp_g23278 PDR1, ATPDR1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16126 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45487 PEN3, ABCG36,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo101338 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo235359 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo441722 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc05g053570.4.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc09g042300.2.1 ATPDR3, PDR3,... ABC transporter G family member 31 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e037233_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 86 153
IPR013525 ABC_2_trans 203 415
No external refs found!