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  5. Als_g47840

Als_g47840


Description : not classified & original description: none


Gene families : OG0001290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g47840

Target Alias Description ECC score Gene Family Method Actions
AT1G54070 No alias Dormancy/auxin associated family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01021092001 DYL1, DRM1 Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa 0.03 OrthoFinder output from all 47 species
GSVIVT01031183001 No alias Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g24337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_118342g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_187623g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8999561g0010 No alias Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa... 0.02 OrthoFinder output from all 47 species
Pnu_g24078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034250_P001 Zm00001e034250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004476 mannose-6-phosphate isomerase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008406 DRM/ARP 7 181
No external refs found!