Als_g45893


Description : component *(eL15) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g45893
Cluster HCCA: Cluster_417

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00023340 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.04 OrthoFinder output from all 47 species
Aop_g00218 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0148.g053106 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.30G015200.1 Ceric.30G015200 component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g12320 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os03g40180.1 LOC_Os03g40180 component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os05g19370.1 LOC_Os05g19370 component RPL15 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c17_22180V3.1 Pp3c17_22180 Ribosomal protein L23/L15e family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016249 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g36073 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc04g008460.4.1 Solyc04g008460 component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g060400.3.1 Solyc06g060400 component RPL15 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc06g064630.3.1 Solyc06g064630 component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g26061 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g39098 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g55931 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g30457 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010380_P001 Zm00001e010380 component RPL15 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e032897_P001 Zm00001e032897 component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e034995_P001 Zm00001e034995 component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e034996_P001 Zm00001e034996 component RPL15 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 1 112
No external refs found!