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  5. Als_g45619

Als_g45619 (IAA9)


Aliases : IAA9

Description : transcriptional repressor *(IAA/AUX) & original description: none


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g45619
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G04730 IAA16 indoleacetic acid-induced protein 16 0.03 OrthoFinder output from all 47 species
Adi_g014500 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049796 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115034 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17900 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02279 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17685 AXR2, IAA7 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26466 IAA4, ATAUX2-11 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G078200.1 IAA4, ATAUX2-11,... transcriptional repressor *(IAA/AUX) & original... 0.02 OrthoFinder output from all 47 species
Dac_g00639 IAA4, ATAUX2-11 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13190 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19267 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05406 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015350001 IAA27, PAP2 Auxin-responsive protein IAA27 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g08320.1 AXR3, IAA17,... Auxin-responsive protein IAA1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53880.1 PAP1, IAA26,... repressor component Aux/IAA of auxin receptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g07040.1 IAA31, LOC_Os06g07040 Auxin-responsive protein IAA20 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40890.1 IAA16, LOC_Os12g40890 Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40900.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_123046g0010 IAA16 repressor component Aux/IAA of auxin receptor complex 0.02 OrthoFinder output from all 47 species
Pir_g07439 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20021 AXR2, IAA7 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31507 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52299 No alias transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g065850.4.1 IAA4, ATAUX2-11,... Auxin-induced protein 22D OS=Vigna radiata var. radiata... 0.02 OrthoFinder output from all 47 species
Spa_g39294 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56777 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g31611 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032398_P001 IAA8, Zm00001e032398 Auxin-responsive protein IAA19 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e032955_P001 IAA4, ATAUX2-11,... Auxin-responsive protein IAA24 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 77 300
No external refs found!