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  5. Als_g44475

Als_g44475 (ATHM1, THM1, TRX-M1, ATM1)


Aliases : ATHM1, THM1, TRX-M1, ATM1

Description : not classified & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g44475
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT5G39950 TRXH2, TRX2,... thioredoxin 2 0.03 OrthoFinder output from all 47 species
Adi_g028432 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g130054 ATTRX4, ATH4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34942 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001041.23 ATTRX1, ATTRX H1, TRX1 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder output from all 47 species
Dcu_g25340 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g58630.1 TRXH2, TRX2,... H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Lfl_g31769 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41374 ATO2, TO2 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 7 63
IPR013766 Thioredoxin_domain 94 130
No external refs found!