Als_g44337 (AXR6, ATCUL1, CUL1)

Aliases : AXR6, ATCUL1, CUL1

Description : not classified & original description: none

Gene families : OG0001888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g44337
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
Adi_g128509	AXR6, ATCUL1, CUL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02070	AXR6, ATCUL1, CUL1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020563.191	AXR6, ATCUL1, CUL1	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
GSVIVT01017740001	AXR6, ATCUL1, CUL1	Cullin-1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Ore_g42712	AXR6, ATCUL1, CUL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g32387	AXR6, ATCUL1, CUL1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Solyc01g067120.4.1	AXR6, ATCUL1,...	no description available(sp\|q5zc88\|cul1_orysj : 145.0)	0.03	OrthoFinder output from all 47 species
Tin_g04133	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquiTin ligase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	1	95

External Links

No external refs found!