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Description : ubiquitin-proteasome shuttle factor *(DSK2) & original description: none
Gene families : OG0001912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001912_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g44178 | |
| Cluster | HCCA: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g057053 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074699 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g117315 | DSK2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07304 | No alias | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000983.16 | No alias | Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05609 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023891001 | DSK2 | Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16088 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25539 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42947 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo171198 | No alias | Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g082800.3.1 | DSK2, Solyc02g082800 | autophagic adaptor protein (DSK2) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g032160.3.1 | DSK2, Solyc03g032160 | autophagic adaptor protein (DSK2) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06039 | DSK2 | ubiquitin-proteasome shuttle factor *(DSK2) & original... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015940 | UBA | 209 | 245 |
| No external refs found! |