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Aliases : TOPII, ATTOPII
Description : not classified & original description: none
Gene families : OG0002559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g44163 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00103p00101630 | TOPII, ATTOPII,... | Cell cycle.interphase.DNA replication.preinitiation.TOP2... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G23890 | TOPII, ATTOPII | topoisomerase II | 0.15 | OrthoFinder output from all 47 species | |
| Ala_g25823 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aop_g14194 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene00301.t1 | TOPII, ATTOPII,... | DNA topoisomerase *(TOP2) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene03757.t1 | TOPII, ATTOPII,... | DNA topoisomerase *(TOP2) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s0248.g060132 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: CDS=3554-4336 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G001800.1 | TOPII, ATTOPII,... | DNA topoisomerase *(TOP2) & original description:... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.22G002000.1 | TOPII, ATTOPII,... | DNA topoisomerase *(TOP2) & original description:... | 0.15 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021432.55 | TOPII, ATTOPII | DNA topoisomerase 2 OS=Pisum sativum | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021433.1 | TOPII, ATTOPII | DNA topoisomerase 2 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021433.2 | TOPII, ATTOPII | DNA topoisomerase 2 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Cre01.g009250 | TOPII, ATTOPII | Cell cycle.interphase.DNA replication.preinitiation.TOP2... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g12747 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g04147 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| GSVIVT01032138001 | TOPII, ATTOPII | Cell cycle.interphase.DNA replication.preinitiation.TOP2... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_11673 | TOPII, ATTOPII | DNA topoisomerase (TOP2) | 0.11 | OrthoFinder output from all 47 species | |
| Gb_12824 | TOPII, ATTOPII | DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 112.0) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os02g47150.1 | TOPII, ATTOPII,... | DNA topoisomerase (TOP2) | 0.08 | OrthoFinder output from all 47 species | |
| Len_g11702 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Len_g32193 | TOPII, ATTOPII | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| MA_133272g0010 | TOPII, ATTOPII | DNA topoisomerase (TOP2) | 0.14 | OrthoFinder output from all 47 species | |
| MA_6634g0010 | TOPII, ATTOPII | DNA topoisomerase (TOP2) | 0.14 | OrthoFinder output from all 47 species | |
| Mp3g13420.1 | TOPII, ATTOPII | DNA topoisomerase (TOP2) | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g37198 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Nbi_g07573 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Ore_g33256 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03282 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0206.g025783 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: CDS=115-4635 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g08991 | No alias | DNA topoisomerase *(TOP2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Smo127267 | TOPII, ATTOPII | Cell cycle.interphase.DNA replication.preinitiation.TOP2... | 0.07 | OrthoFinder output from all 47 species | |
| Smo98330 | TOPII, ATTOPII | Cell cycle.interphase.DNA replication.preinitiation.TOP2... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g087500.3.1 | TOPII, ATTOPII,... | DNA topoisomerase (TOP2) | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g02147 | TOPII, ATTOPII | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g48476 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50976 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g55866 | TOPII, ATTOPII | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g11875 | TOPII, ATTOPII | DNA topoisomerase *(TOP2) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e015542_P001 | TOPII, ATTOPII,... | DNA topoisomerase (TOP2) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e023296_P001 | TOPII, ATTOPII,... | DNA topoisomerase (TOP2) | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
| BP | GO:0032392 | DNA geometric change | IEP | HCCA |
| BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |