1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g43556

Als_g43556


Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g43556
Cluster HCCA: Cluster_417

Target Alias Description ECC score Gene Family Method Actions
AT3G45030 No alias Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
AT3G47370 No alias Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
AT5G62300 No alias Ribosomal protein S10p/S20e family protein 0.03 OrthoFinder output from all 47 species
Aop_g23202 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.10G040000.1 Ceric.10G040000 component *(uS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.28 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre16.g660150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g24923 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01018553001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14530.1 LOC_Os03g14530 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os06g04290.1 LOC_Os06g04290 component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os10g08930.1 LOC_Os10g08930 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_10429759g0010 No alias component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g24561 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c1_21860V3.1 Pp3c1_21860 Ribosomal protein S10p/S20e family protein 0.01 OrthoFinder output from all 47 species
Solyc01g096580.3.1 Solyc01g096580 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc01g096590.3.1 Solyc01g096590 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g27726 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e001045_P001 Zm00001e001045 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e036579_P001 Zm00001e036579 component RPS20 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e038574_P001 Zm00001e038574 component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0019028 viral capsid IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
CC GO:0044423 virion component IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 26 120
No external refs found!