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  5. Pnu_g14561

Pnu_g14561 (UGE5)


Aliases : UGE5

Description : EC_5.1 racemase or epimerase & original description: none


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g14561
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Aop_g04467 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21874 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
MA_113087g0010 REB1, UGE4, RHD1 UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis... 0.02 OrthoFinder output from all 47 species
MA_28209g0010 MUR4, UXE1, HSR8 UDP-D-xylose 4-epimerase 0.03 OrthoFinder output from all 47 species
Ore_g04494 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44408 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g006410.3.1 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.02 OrthoFinder output from all 47 species
Solyc12g055930.3.1 UGE2, ATUGE2,... UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
Zm00001e038369_P001 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 20 344
No external refs found!