1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g42471

Als_g42471


Description : assembly factor (eIF1) of eIF1 & original description: none


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g42471

Target Alias Description ECC score Gene Family Method Actions
AT5G54940 No alias Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene67777.t1 Aspi01Gene67777 assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s2629.g112458 No alias assembly factor (eIF1) of eIF1 & original description: CDS=18-188 0.04 OrthoFinder output from all 47 species
Ceric.1Z216600.1 Ceric.1Z216600 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G055600.1 Ceric.26G055600 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os05g41900.1 LOC_Os05g41900 assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
Lfl_g06395 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20659 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42227 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.04 OrthoFinder output from all 47 species
Solyc07g064620.2.1 Solyc07g064620 assembly factor (eIF1) of eIF1 0.04 OrthoFinder output from all 47 species
Solyc10g006470.3.1 Solyc10g006470 assembly factor (eIF1) of eIF1 0.04 OrthoFinder output from all 47 species
Zm00001e019581_P001 Zm00001e019581 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 26 100
No external refs found!