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  5. Als_g42174

Als_g42174 (PBP1)


Aliases : PBP1

Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g42174
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00014000 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013226001 PBP1 Calcium-binding protein PBP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09603 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41840 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g006710.1.1 Solyc03g006710 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g56724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019618_P001 PBP1, Zm00001e019618 Calcium-binding protein PBP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 40 89
No external refs found!