Aliases : PABP4, PAB4
Description : not classified & original description: none
Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Als_g41845 | |
Cluster | HCCA: Cluster_133 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G34110 | PAB2, PABP2, ATPAB2 | poly(A) binding protein 2 | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06987 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g06701 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g13188 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01016951001 | PAB6 | Protein biosynthesis.translation initiation.mRNA... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g22689 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g54838 | PAB2, PABP2, ATPAB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05877 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002004 | PABP_HYD | 96 | 133 |
No external refs found! |