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  5. Als_g39979

Als_g39979 (CSY2)


Aliases : CSY2

Description : citrate synthase & original description: none


Gene families : OG0002699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g39979
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT3G58750 CSY2 citrate synthase 2 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015807 CSY2 citrate synthase & original description: CDS=64-1638 0.04 OrthoFinder output from all 47 species
GSVIVT01037027001 PGP9 ABC transporter B family member 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g13840.1 CSY3, LOC_Os02g13840 citrate synthase 0.02 OrthoFinder output from all 47 species
Pir_g11695 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019351 CSY3 citrate synthase & original description: CDS=142-1683 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 88 355
No external refs found!