Als_g39978 (PDR6, ATPDR6)

Aliases : PDR6, ATPDR6

Description : not classified & original description: none

Gene families : OG0002595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002595_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g39978

Target	Alias	Description	ECC score	Gene Family Method
Aop_g43718	PDR6, ATPDR6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017186001	ABCG40, PDR12,...	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum	0.02	OrthoFinder output from all 47 species
LOC_Os02g21350.1	PDR6, ATPDR6,...	ABC transporter G family member 40 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
LOC_Os09g16300.1	LOC_Os09g16300	ABC transporter G family member 46 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_218328g0010	PEN3, ABCG36,...	ABC transporter G family member 36 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g29932	PDR6, ATPDR6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61713	PDR6, ATPDR6	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	121	170
IPR003439	ABC_transporter-like_ATP-bd	195	303

External Links

No external refs found!