Als_g39723 (MS2, ATMS2)

Aliases : MS2, ATMS2

Description : methyl-tetrahydrofolate-dependent methionine synthase & original description: none

Gene families : OG0000901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000901_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g39723

Target	Alias	Description	ECC score	Gene Family Method
AT3G03780	MS2, ATMS2	methionine synthase 2	0.02	OrthoFinder output from all 47 species
Aspi01Gene40772.t1	ATCIMS, ATMS1,...	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Cba_g14828	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Dac_g21138	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Dcu_g20010	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08038	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_23743	MS2, ATMS2	methyl-tetrahydrofolate-dependent methionine synthase	0.03	OrthoFinder output from all 47 species
Lfl_g04166	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Msp_g34030	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Nbi_g24444	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.06	OrthoFinder output from all 47 species
Pir_g03288	ATCIMS, ATMS1, ATMETS	methyl-tetrahydrofolate-dependent methionine synthase &...	0.03	OrthoFinder output from all 47 species
Pir_g06016	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Spa_g03147	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g06170	MS2, ATMS2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g14432	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g14699	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Zm00001e005228_P001	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.03	OrthoFinder output from all 47 species
Zm00001e012368_P001	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008172	S-methyltransferase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0008652	amino acid biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013215	Cbl-indep_Met_Synth_N	3	212

External Links

No external refs found!

Als_g39723 (MS2, ATMS2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation