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  5. Als_g39202

Als_g39202


Description : not classified & original description: none


Gene families : OG0001433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001433_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g39202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217580 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00067890 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
AT4G39680 No alias SAP domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g017411 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aev_g07965 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Ala_g02544 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ala_g16232 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Aob_g07390 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Aop_g14212 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Cba_g39106 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Cba_g39107 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ceric.04G016900.1 Ceric.04G016900 component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ceric.13G077200.1 Ceric.13G077200 component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dcu_g09840 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.07 OrthoFinder output from all 47 species
Dcu_g39092 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dcu_g42746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23233 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dde_g25731 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ehy_g12307 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Ehy_g19978 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
GSVIVT01008977001 No alias RNA processing.RNA quality control Exon Junction complex... 0.07 OrthoFinder output from all 47 species
GSVIVT01022190001 No alias RNA processing.RNA quality control Exon Junction complex... 0.03 OrthoFinder output from all 47 species
LOC_Os03g26630.1 LOC_Os03g26630 component ACINUS of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Len_g24712 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Lfl_g34375 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
MA_7197g0010 No alias component ACINUS of RNA quality control Exon Junction complex 0.06 OrthoFinder output from all 47 species
Mp2g15000.1 No alias component ACINUS of RNA quality control Exon Junction complex 0.04 OrthoFinder output from all 47 species
Msp_g25304 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Msp_g44218 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Nbi_g09348 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ore_g42805 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Pir_g56887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42834 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Sam_g04087 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Smo442865 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Solyc04g072670.4.1 Solyc04g072670 component ACINUS of RNA quality control Exon Junction complex 0.05 OrthoFinder output from all 47 species
Spa_g08782 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.07 OrthoFinder output from all 47 species
Spa_g12594 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Tin_g04883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05227 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Zm00001e001848_P001 Zm00001e001848 component ACINUS of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Zm00001e037964_P002 Zm00001e037964 component ACINUS of RNA quality control Exon Junction complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003034 SAP_dom 13 47
No external refs found!