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  5. Als_g38727

Als_g38727 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38727
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00192990 PDR11, ATPDR11,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.02 OrthoFinder output from all 47 species
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 OrthoFinder output from all 47 species
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.02 OrthoFinder output from all 47 species
Adi_g034248 PDR4, ATPDR4 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055702 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27487 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18808 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38651 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05367 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31181 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14195 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33432 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70240 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02114.t4 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53447.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64035.t2 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0388.g067636 ATPDR3, PDR3 subfamily ABCG transporter & original description: CDS=125-3580 0.03 OrthoFinder output from all 47 species
Ceric.19G065600.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G052500.1 PEN3, ABCG36,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000270.11 PDR1, ATPDR1 ABC transporter G family member 38 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dcu_g25305 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16376 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017198001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01017204001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01033804001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034746001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_34646 PDR4, ATPDR4 cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g42410.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g32690.1 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g33740 ATPDR7, PDR7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427561g0020 ABCG40, PDR12,... ABC transporter G family member 31 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_184352g0010 ABCG40, PDR12,... ABC transporter G family member 36 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ore_g26198 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c19_17390V3.1 PDR1, ATPDR1,... pleiotropic drug resistance 1 0.01 OrthoFinder output from all 47 species
Ppi_g33371 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39006 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g40984 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40989 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37196 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g101070.3.1 PIS1, ABCG37,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc05g018510.3.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc08g067610.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g019640.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g09436 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30715 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56833 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020666_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 722 788
IPR013525 ABC_2_trans 505 717
IPR013525 ABC_2_trans 1182 1395
IPR029481 ABC_trans_N 96 146
IPR043926 ABCG_dom 384 459
IPR043926 ABCG_dom 1066 1127
IPR003439 ABC_transporter-like_ATP-bd 169 351
IPR003439 ABC_transporter-like_ATP-bd 885 1037
No external refs found!