1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g38449

Als_g38449


Description : recombination mediator *(RAD52) & original description: none


Gene families : OG0002626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002626_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38449
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Als_g23606 No alias recombination mediator *(RAD52) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05723 No alias recombination mediator *(RAD52) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58298 No alias recombination mediator *(RAD52) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08811 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g63450.1 LOC_Os03g63450 recombination mediator (RAD52) 0.04 OrthoFinder output from all 47 species
Ore_g26536 No alias recombination mediator *(RAD52) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24401 No alias recombination mediator *(RAD52) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006377_P001 Zm00001e006377 recombination mediator (RAD52) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA

No InterPro domains available for this sequence

No external refs found!