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  5. Als_g38101

Als_g38101


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38101
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Adi_g011762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G024100.1 Ceric.25G024100 not classified & original description: pacid=50593743... 0.02 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_61451g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_6399g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g12894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009927 No alias not classified & original description: CDS=200-1417 0.04 OrthoFinder output from all 47 species
Spa_g24429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30854 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 347 388
No external refs found!