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  5. Als_g37977

Als_g37977


Description : not classified & original description: none


Gene families : OG0003340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g37977

Target Alias Description ECC score Gene Family Method Actions
AT1G47271 No alias Cystathionine beta-synthase (CBS) family protein 0.02 OrthoFinder output from all 47 species
AT5G10860 No alias Cystathionine beta-synthase (CBS) family protein 0.02 OrthoFinder output from all 47 species
Azfi_s0229.g059112 No alias not classified & original description: CDS=287-946 0.02 OrthoFinder output from all 47 species
Dde_g01275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024516001 No alias CBS domain-containing protein CBSX3, mitochondrial... 0.03 OrthoFinder output from all 47 species
Ppi_g02722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g080510.3.1 Solyc04g080510 CBS domain-containing protein CBSX3, mitochondrial... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 123 179
IPR000644 CBS_dom 65 111
No external refs found!