Description : not classified & original description: none
Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Als_g37951 | |
Cluster | HCCA: Cluster_95 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G58450 | No alias | Adenine nucleotide alpha hydrolases-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G27320 | ATPHOS34, PHOS34 | Adenine nucleotide alpha hydrolases-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G54430 | PHOS32, ATPHOS32 | Adenine nucleotide alpha hydrolases-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g079009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g01816 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g19519 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g25422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g36147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g39099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g38455 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Als_g38527 | RD2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g44724 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g21781 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene24164.t1 | RD2, Aspi01Gene24164 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene25652.t1 | Aspi01Gene25652 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene59960.t1 | Aspi01Gene59960 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g33156 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.37G020500.1 | Ceric.37G020500 | not classified & original description: pacid=50615565... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g00478 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g43626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g10171 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01024846001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g19820.3 | LOC_Os01g19820 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g06500.1 | LOC_Os05g06500 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g36600.1 | LOC_Os07g36600 | Universal stress protein PHOS32 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g25076 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g27197 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g28997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10431338g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g02950.1 | No alias | Universal stress protein PHOS32 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Pir_g50626 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g05401 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g59165 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g20155 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo74840 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g057000.3.1 | Solyc01g057000 | Universal stress protein A-like protein OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g100370.3.1 | Solyc01g100370 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g109710.3.1 | RD2, Solyc01g109710 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g009050.3.1 | Solyc06g009050 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g084540.3.1 | Solyc06g084540 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g14630 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02317 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027691_P001 | Zm00001e027691 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040676_P001 | Zm00001e040676 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
CC | GO:0000124 | SAGA complex | IEP | HCCA |
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006405 | RNA export from nucleus | IEP | HCCA |
BP | GO:0006406 | mRNA export from nucleus | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030118 | clathrin coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0040008 | regulation of growth | IEP | HCCA |
MF | GO:0042802 | identical protein binding | IEP | HCCA |
MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0050657 | nucleic acid transport | IEP | HCCA |
BP | GO:0050658 | RNA transport | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0051028 | mRNA transport | IEP | HCCA |
MF | GO:0051087 | chaperone binding | IEP | HCCA |
BP | GO:0051168 | nuclear export | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051236 | establishment of RNA localization | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060590 | ATPase regulator activity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006016 | UspA | 52 | 205 |
No external refs found! |